Bioinformatics Training from the University of California
Next generation DNA sequencing technology is touted as enabling the next wave of the genomics revolution. Massively-parallel generation of DNA “reads” makes it possible to sequence entire genomes the size of the human genome, within days and for a few thousands dollars. It also allows individual laboratories to do research that was previously only possible at large genome centers. The widespread availability of this technology is stimulating the development of a large array of innovative approaches to genome-wide investigations, but comes at the cost of sparse or incomplete training opportunities for these advancing technologies. We at the University of California, Davis Bioinformatics Core seek to change that by offering a number of varied length workshops focusing on various aspects of bioinformatics and biostatistics.
We offer a number of intensive workshops on RNA-seq, data analysis and visualization, and cloud computing with a focus on leveraging Amazon’s computing resources. During our week-long workshops, we cover in-depth the practical theory and application of cutting-edge next-generation sequencing techniques. We also host a number of intensive but easy-to-digest 1-day events providing practical answers and hands-on techniques to the hottest topics in bioinformatics. All training events provide ample time for personalized help from experienced Bioinformatics Core personnel.
Our bioinformatics workshops are perfectly suited to your learning curve through this personalized attention whether you are a scientist, academic instructor, industry professional, or graduate student.
For more information on training offerings, you may check back here periodically, or contact us directly with any questions.
The Bioinformatics Core is pleased to announce three training opportunities which will be held at UC Davis in 2015:
- March 23-26: RNA-Seq and ChIP-Seq Analysis with Galaxy
- June 15-19: Using the Linux Command Line for Analysis of High Throughput Sequence Data
- September 14-18: Using Galaxy for Analysis of High Throughput Sequence Data
Registration is now open for the March workshop, so sign up now to reserve your place! Registration for later workshops will open following the conclusion of the preceding workshop.
We hope to see you this year!
The UC Davis Bioinformatics Core Team
The DNA Tech and Gene Expression Analysis Core is offering a three day library preparation workshop from October 22nd to 24th. You can bring your own RNA-sample, generate your first RNA-seq library, and generate your first data during the course. The course will cover the technical details and provide an introduction into the data analysis. Please see the news page link for more details:
We are pleased to announce the release of our newest Galaxy/command-line Amazon Machine Image. The new features of this AMI include updated versions of all of the bioinformatics software, updated and fixed Galaxy tool interfaces, and a Galaxy FTP server that makes it easy to transfer large files to Galaxy. Instructions on how to launch this new AMI and how to use the Galaxy FTP server are located on our software page. We hope that all of your research endeavours are going well and we hope to hear from you or see you in a workshop sometime soon!
The Bioinformatics Core is pleased to announce three training opportunities which will be held at UC Davis in 2014:
- March 26-27: UC Davis Mission Critical Bioinformatics Workshop – iPlant/iAnimal Data to Publication
- June 16-20: Using Galaxy for Analysis of High Throughput Sequence Data
- September 15-19: Using the Linux Command Line for Analysis of High Throughput Sequence Data
Please click on the links to get full information about each opportunity. We hope to see you this year!